EnhancerDB
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  3. rs557903669[chr1:36721430]
Enhancers that have rs557903669[chr1:36721430]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 36701987 36724964 enh240
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Epithelial (MCF-7) Stomach Bone (Osteoblast) Blood (OCI-LY7) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
chr1 36721428 36721771 vista1192
VISTA
Transcript factors that have rs557903669[chr1:36721430]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 36721276 36721604 ZNF143 GTRD no Epithelial (MCF-7) 107802836
chr1 36721420 36721434 GATA2 JASPAR yes 28131131
chr1 36721420 36721434 GATA2 JASPAR yes 118271929
chr1 36721422 36721430 GATA3 JASPAR yes 28131132
chr1 36721422 36721430 GATA5 JASPAR yes 28131133
chr1 36721422 36721430 GATA3 JASPAR yes 118271930
chr1 36721422 36721430 GATA5 JASPAR yes 118271931
chr1 36721424 36721439 FOXP1 JASPAR yes 28131134
chr1 36721424 36721439 FOXP1 JASPAR yes 118271932
chr1 36721424 36721445 IRF1 JASPAR yes 28131135
chr1 36721424 36721445 IRF1 JASPAR yes 118271933
chr1 36721426 36721431 ETS2 TRANSFAC yes 28131136
chr1 36721426 36721431 ETS2 TRANSFAC yes 118271934
chr1 36721428 36721443 STAT2 JASPAR yes 28131137
chr1 36721428 36721443 STAT2 JASPAR yes 118271935
Genes associated with rs557903669[chr1:36721430], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More