EnhancerDB
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  3. rs557932301[chr2:28935758]
Enhancers that have rs557932301[chr2:28935758]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 28928585 28946675 enh18396
Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Pancreas Uterus Kidney Epithelial (MCF-7) Skin (Keratinocyte) Stomach Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Prostate (RWPE1) Lung Muscle (A673)
Transcript factors that have rs557932301[chr2:28935758]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 28935744 28935759 FOXP1 JASPAR yes 72672467
chr2 28935744 28935764 RREB1 JASPAR yes 72672468
chr2 28935744 28935765 IRF1 JASPAR yes 72672469
chr2 28935745 28935766 IRF1 JASPAR yes 72672470
chr2 28935746 28935766 RREB1 JASPAR yes 72672471
chr2 28935751 28935766 FOXP1 JASPAR yes 72672472
chr2 28935751 28935771 RREB1 JASPAR yes 72672473
chr2 28935753 28935773 RREB1 JASPAR yes 72672474
chr2 28935755 28935770 FOXP1 JASPAR yes 72672475
chr2 28935756 28935767 FOXA1 JASPAR yes 72672476
chr2 28935756 28935771 FOXA1 JASPAR yes 72672477
chr2 28935757 28935769 FOXC2 JASPAR yes 72672478
chr2 28935757 28935777 RREB1 JASPAR yes 72672479
chr2 28935758 28935770 FOXI1 JASPAR yes 72672480
chr2 28935758 28935778 RREB1 JASPAR yes 72672481
Genes associated with rs557932301[chr2:28935758], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More