EnhancerDB
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  3. rs55800729[chr15:65102898]
Enhancers that have rs55800729[chr15:65102898]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr15 65090749 65107680 enh16235
Cervix (HeLa-S3) Brain (SK-N-SH) Large Intestine Ovary Lung Blood (GM12878) Stomach Colon (HCT116) Placenta Uterus Embryonic Stem Cell Line (H1-hESC) Spleen Neural Stem Cells (H9) Heart
Transcript factors that have rs55800729[chr15:65102898]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr15 65101856 65102920 TCF7L2 GTRD no Colon (HCT116) 21659776
chr15 65102686 65103322 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21659802
chr15 65102686 65103322 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108145897
chr15 65102897 65102906 SP1 TRANSFAC yes 24067409
chr15 65102898 65102904 SP1 TRANSFAC yes 24067410
chr15 65102898 65102908 SP1 JASPAR yes 24067411
Genes associated with rs55800729[chr15:65102898], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More