EnhancerDB
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  3. rs558078349[chr17:62991605]
Enhancers that have rs558078349[chr17:62991605]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 62953485 63000035 enh4531
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs558078349[chr17:62991605]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 62991189 62991662 TCF7L2 GTRD no Colon (HCT116) 21780901
chr17 62991189 62991662 TCF7L2 GTRD no Colon (HCT116) 108283289
chr17 62991241 62991618 ZNF143 GTRD no Epithelial (MCF-7) 21780902
chr17 62991241 62991618 ZNF143 GTRD no Epithelial (MCF-7) 108283290
chr17 62991601 62991605 YY1 TRANSFAC yes 55336953
Genes associated with rs558078349[chr17:62991605], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More