EnhancerDB
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  3. rs558113523[chr19:11054804]
Enhancers that have rs558113523[chr19:11054804]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 11044165 11061272 enh17918
Bone Marrow (K562) Brain (SK-N-MC) Colon (HCT116) Pancreas Uterus Stomach Epithelial (MCF-7) Skin (Keratinocyte) Brain (SK-N-SH) Blood (OCI-LY7) Lung (A549) Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Spleen Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs558113523[chr19:11054804]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 11054114 11055142 ZNF143 GTRD no Epithelial (MCF-7) 21849280
chr19 11054787 11054808 IRF1 JASPAR yes 112447309
chr19 11054790 11054804 IRF7 JASPAR yes 112447311
chr19 11054792 11054804 IRF1 JASPAR yes 112447312
chr19 11054793 11054808 FOXP1 JASPAR yes 112447313
chr19 11054793 11054808 MEF2C JASPAR yes 112447314
chr19 11054793 11054814 IRF1 JASPAR yes 112447315
chr19 11054794 11054809 MEF2A JASPAR yes 112447316
chr19 11054795 11054807 FOXC2 JASPAR yes 112447317
chr19 11054795 11054807 MEF2A JASPAR yes 112447318
chr19 11054795 11054807 MEF2B JASPAR yes 112447319
chr19 11054795 11054807 MEF2D JASPAR yes 112447320
chr19 11054796 11054806 MEF2A JASPAR yes 112447321
chr19 11054797 11054812 FOXP1 JASPAR yes 112447322
chr19 11054798 11054819 IRF1 JASPAR yes 112447323
chr19 11054799 11054814 FOXP1 JASPAR yes 112447324
chr19 11054801 11054816 FOXP1 JASPAR yes 112447325
chr19 11054803 11054809 TBP TRANSFAC yes 112447326
chr19 11054804 11054825 IRF1 JASPAR yes 112447327
Genes associated with rs558113523[chr19:11054804], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More