EnhancerDB
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  3. rs558120039[chr6:86118269]
Enhancers that have rs558120039[chr6:86118269]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 86109285 86118699 enh23394
Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Blood (T-cell) Stomach Skin (Keratinocyte) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs558120039[chr6:86118269]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 86118263 86118284 IRF1 JASPAR yes 103252577
chr6 86118268 86118283 FOXP1 JASPAR yes 103252578
chr6 86118269 86118284 FOXP1 JASPAR yes 103252579
chr6 86118269 86118290 IRF1 JASPAR yes 103252580
Genes associated with rs558120039[chr6:86118269], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More