EnhancerDB
  1. Home
  2. SNP
  3. rs558132002[chr6:107172204]
Enhancers that have rs558132002[chr6:107172204]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 107161265 107207435 enh9283
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Lung (PC-9) Liver Blood (OCI-LY7) Lung (A549) Stomach Muscle (A673) Placenta Thyroid Blood (Karpas-422) Muscle (Myoblast) Pancreas Muscle (Myotube) Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs558132002[chr6:107172204]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 107172201 107172215 ONECUT2 JASPAR yes 104062335
chr6 107172201 107172215 ONECUT3 JASPAR yes 104062336
chr6 107172202 107172213 DUX4 JASPAR yes 104062337
Genes associated with rs558132002[chr6:107172204], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More