EnhancerDB
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  3. rs558174138[chr16:89542459]
Enhancers that have rs558174138[chr16:89542459]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 89534745 89554855 enh32031
Liver Astrocyte Colon (HCT116) Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Lung (PC-9) Muscle (Myoblast) Breast Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs558174138[chr16:89542459]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 89542456 89542471 FOXP1 JASPAR yes 12348568
chr16 89542457 89542472 FOXP1 JASPAR yes 12348569
chr16 89542458 89542473 FOXP1 JASPAR yes 12348570
chr16 89542458 89542479 IRF1 JASPAR yes 12348571
chr16 89542459 89542474 FOXP1 JASPAR yes 12348572
chr16 89542459 89542480 IRF1 JASPAR yes 12348573
Genes associated with rs558174138[chr16:89542459], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More