EnhancerDB
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  3. rs55819421[chr17:49017481]
Enhancers that have rs55819421[chr17:49017481]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 49015225 49039275 enh17224
Bone Marrow (K562) Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs55819421[chr17:49017481]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 49014272 49017787 ZNF143 GTRD no Epithelial (MCF-7) 21771342
chr17 49014272 49017787 ZNF143 GTRD no Epithelial (MCF-7) 21771343
chr17 49016481 49017487 ZNF143 GTRD no Epithelial (MCF-7) 21771384
chr17 49016812 49017719 ZNF274 GTRD no Cervix (HeLa-S3) 21771396
chr17 49017230 49017530 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21771405
chr17 49017252 49017868 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21771406
chr17 49017256 49017482 ZNF274 GTRD no Cervix (HeLa-S3) 21771407
chr17 49017421 49017711 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21771408
chr17 49017461 49017482 ZNF263 JASPAR yes 54736701
chr17 49017461 49017801 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21771409
chr17 49017462 49017483 ZNF263 JASPAR yes 54736703
chr17 49017465 49017486 ZNF263 JASPAR yes 54736704
chr17 49017474 49017495 ZNF263 JASPAR yes 54736705
chr17 49017476 49017481 ETS2 TRANSFAC yes 54736706
Genes associated with rs55819421[chr17:49017481], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More