EnhancerDB
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  3. rs558196485[chr12:52549266]
Enhancers that have rs558196485[chr12:52549266]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 52531174 52553795 enh2357
Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Thyroid Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs558196485[chr12:52549266]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 52549168 52549632 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21546516
chr12 52549224 52549620 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21546517
chr12 52549251 52549266 HNF4G JASPAR yes 120923035
chr12 52549265 52549275 ZNF740 JASPAR yes 120923037
Genes associated with rs558196485[chr12:52549266], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More