EnhancerDB
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  3. rs558215193[chr1:232769956]
Enhancers that have rs558215193[chr1:232769956]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 232744026 232773755 enh12786
Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Large Intestine Esophagus Placenta Lung (PC-9) Spleen Lung Muscle (A673) Heart
Transcript factors that have rs558215193[chr1:232769956]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 232769830 232770020 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21392322
chr1 232769953 232769971 NFYA JASPAR yes 36180132
Genes associated with rs558215193[chr1:232769956], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More