EnhancerDB
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  3. rs558223450[chr12:125325810]
Enhancers that have rs558223450[chr12:125325810]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 125303965 125343315 enh2677
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs558223450[chr12:125325810]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 125325804 125325818 GLIS2 JASPAR yes 124425601
chr12 125325805 125325816 E2F1 JASPAR yes 124425602
chr12 125325806 125325817 E2F4 JASPAR yes 124425603
chr12 125325806 125325817 E2F6 JASPAR yes 124425604
Genes associated with rs558223450[chr12:125325810], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More