EnhancerDB
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  3. rs558229943[chr5:78052070]
Enhancers that have rs558229943[chr5:78052070]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 78038905 78058872 enh8512
Prostate (PC-3) Liver (HepG2) Brain (SK-N-SH) Lung (PC-9) Astrocyte Bone (Osteoblast) Blood (OCI-LY7) Blood (GM12878) Stomach Peripheral Blood (MM.1S) Uterus Blood (Karpas-422) Muscle (Myoblast) Pancreas Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs558229943[chr5:78052070]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 78052066 78052078 FOXC2 JASPAR yes 63622175
chr5 78052068 78052079 FOXA1 JASPAR yes 63622176
chr5 78052070 78052080 RELA JASPAR yes 63622177
Genes associated with rs558229943[chr5:78052070], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More