EnhancerDB
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  3. rs558234004[chr1:27468912]
Enhancers that have rs558234004[chr1:27468912]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 27456674 27477960 enh171
Bone Marrow (K562) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Breast Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs558234004[chr1:27468912]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 27468897 27468912 MEF2A JASPAR yes 27681207
chr1 27468901 27468915 POU1F1 JASPAR yes 27681209
chr1 27468902 27468914 POU3F1 JASPAR yes 27681210
chr1 27468902 27468914 POU3F2 JASPAR yes 27681211
chr1 27468902 27468915 POU3F3 JASPAR yes 27681212
chr1 27468903 27468915 POU2F1 JASPAR yes 27681213
chr1 27468904 27468913 POU3F4 JASPAR yes 27681214
chr1 27468904 27468913 POU5F1B JASPAR yes 27681215
chr1 27468908 27468921 HSF1 JASPAR yes 27681216
chr1 27468908 27468921 HSF2 JASPAR yes 27681217
Genes associated with rs558234004[chr1:27468912], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More