EnhancerDB
  1. Home
  2. SNP
  3. rs558246425[chr12:50979651]
Enhancers that have rs558246425[chr12:50979651]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 50971777 51003055 enh2348
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Ovary Bone (Osteoblast) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Placenta Lung (PC-9) Muscle (Myotube) Liver (HepG2) Muscle (A673) Heart
Transcript factors that have rs558246425[chr12:50979651]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 50979643 50979652 HIC2 JASPAR yes 120847835
chr12 50979644 50979665 IRF1 JASPAR yes 120847836
chr12 50979649 50979653 YY1 TRANSFAC yes 120847838
Genes associated with rs558246425[chr12:50979651], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More