EnhancerDB
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  3. rs558254750[chr1:2165828]
Enhancers that have rs558254750[chr1:2165828]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 2162230 2193653 enh11423
Bone Marrow (K562) Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Thymus Cervix (HeLa-S3) Large Intestine Esophagus Placenta Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs558254750[chr1:2165828]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 2165817 2165834 RXRA JASPAR yes 26224805
chr1 2165820 2165835 ZIC3 JASPAR yes 26224807
chr1 2165820 2165835 ZIC4 JASPAR yes 26224808
chr1 2165821 2165835 GLIS2 JASPAR yes 26224809
chr1 2165821 2165835 GLIS3 JASPAR yes 26224810
chr1 2165821 2165835 ZIC1 JASPAR yes 26224811
chr1 2165824 2165829 SP1 TRANSFAC yes 26224812
chr1 2165824 2165834 ZNF740 JASPAR yes 26224813
chr1 2165825 2165835 ZNF740 JASPAR yes 26224814
Genes associated with rs558254750[chr1:2165828], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More