EnhancerDB
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  3. rs55827143[chr11:13143544]
Enhancers that have rs55827143[chr11:13143544]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr11 13110005 13145006 enh28608
Bone Marrow (K562) Astrocyte Colon (HCT116) Stomach Epithelial (MCF-7) Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Lung (A549) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1)
Transcript factors that have rs55827143[chr11:13143544]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr11 13142836 13144168 ZBTB33 GTRD no Lung (A549) 21472731
chr11 13143405 13143993 ZNF143 GTRD no Epithelial (MCF-7) 21472732
chr11 13143415 13143922 ZNF274 GTRD no Bone Marrow (K562) 21472733
chr11 13143425 13143862 ZNF274 GTRD no Bone Marrow (K562) 21472734
chr11 13143443 13143872 ZNF143 GTRD no Epithelial (MCF-7) 21472735
chr11 13143533 13143546 NFKB1 JASPAR yes 37506772
chr11 13143538 13143544 ZNF354C JASPAR yes 37506773
chr11 13143543 13143557 PLAG1 JASPAR yes 37506774
Genes associated with rs55827143[chr11:13143544], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More