EnhancerDB
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  3. rs558290962[chr12:50981945]
Enhancers that have rs558290962[chr12:50981945]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 50971777 51003055 enh2348
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Ovary Bone (Osteoblast) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Placenta Lung (PC-9) Muscle (Myotube) Liver (HepG2) Muscle (A673) Heart
Transcript factors that have rs558290962[chr12:50981945]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 50981924 50981945 IRF1 JASPAR yes 120848197
chr12 50981925 50981946 IRF1 JASPAR yes 120848199
chr12 50981926 50981947 IRF1 JASPAR yes 120848201
chr12 50981930 50981951 IRF1 JASPAR yes 120848205
chr12 50981931 50981946 FOXP1 JASPAR yes 120848206
chr12 50981931 50981952 IRF1 JASPAR yes 120848207
chr12 50981932 50981947 PRDM1 JASPAR yes 120848208
chr12 50981932 50981953 IRF1 JASPAR yes 120848209
chr12 50981934 50981949 STAT2 JASPAR yes 120848210
chr12 50981935 50981949 STAT1 JASPAR yes 120848211
chr12 50981936 50981950 IRF7 JASPAR yes 120848212
chr12 50981936 50981957 IRF1 JASPAR yes 120848213
chr12 50981937 50981952 FOXP1 JASPAR yes 120848214
chr12 50981938 50981953 PRDM1 JASPAR yes 120848215
chr12 50981942 50981956 IRF7 JASPAR yes 120848216
Genes associated with rs558290962[chr12:50981945], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More