EnhancerDB
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  3. rs558331598[chr17:55480669]
Enhancers that have rs558331598[chr17:55480669]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 55477469 55505815 enh4487
Brain (SK-N-MC) Blood (Karpas-422) Pancreas Uterus Stomach Brain (SK-N-SH) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Blood (GM12878) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs558331598[chr17:55480669]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 55480649 55480670 IRF1 JASPAR yes 54951297
chr17 55480657 55480678 IRF1 JASPAR yes 54951299
chr17 55480661 55480675 IRF8 JASPAR yes 54951301
chr17 55480661 55480676 IRF9 JASPAR yes 54951302
chr17 55480663 55480684 IRF1 JASPAR yes 54951303
Genes associated with rs558331598[chr17:55480669], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More