EnhancerDB
  1. Home
  2. SNP
  3. rs55837406[chr1:16512391]
Enhancers that have rs55837406[chr1:16512391]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 16486025 16524255 enh11545
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs55837406[chr1:16512391]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 16512385 16512397 HLF JASPAR yes 27032878
chr1 16512387 16512398 YY2 JASPAR yes 27032879
chr1 16512388 16512400 YY1 JASPAR yes 27032880
chr1 16512391 16512406 FOXA1 JASPAR yes 27032881
Genes associated with rs55837406[chr1:16512391], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More