EnhancerDB
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  3. rs55839534[chr16:69107241]
Enhancers that have rs55839534[chr16:69107241]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 69101372 69114315 enh16749
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Muscle (A673) Placenta Colon (HCT116) Lung (PC-9) Pancreas (Panc1) Neural Stem Cells (H9) Stomach
Transcript factors that have rs55839534[chr16:69107241]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 69105023 69108139 ZNF143 GTRD no Epithelial (MCF-7) 108202990
chr16 69105051 69108082 ZNF143 GTRD no Epithelial (MCF-7) 108202991
chr16 69105130 69107836 ZBTB33 GTRD no Lung (A549) 108202995
chr16 69105132 69109016 ZBTB33 GTRD no Lung (A549) 108202996
chr16 69105204 69107963 ZBTB33 GTRD no Lung (A549) 108203005
chr16 69105408 69107952 ZNF274 GTRD no Blood (GM12878) 108203026
chr16 69105416 69107605 ZNF143 GTRD no Epithelial (MCF-7) 108203028
chr16 69105444 69107409 ZNF274 GTRD no Bone Marrow (K562) 108203033
chr16 69105445 69107792 ZBTB33 GTRD no Lung (A549) 108203034
chr16 69105458 69107415 ZNF274 GTRD no Bone Marrow (K562) 108203035
chr16 69105459 69108061 TCF7L2 GTRD no Colon (HCT116) 21711550
chr16 69105459 69108061 TCF7L2 GTRD no Colon (HCT116) 108203036
chr16 69105515 69107407 ZBTB33 GTRD no Lung (A549) 108203045
chr16 69105519 69107602 ZNF143 GTRD no Epithelial (MCF-7) 108203046
chr16 69105545 69108226 TCF7L2 GTRD no Colon (HCT116) 21711552
chr16 69105545 69108226 TCF7L2 GTRD no Colon (HCT116) 108203048
chr16 69105577 69108218 TCF7L2 GTRD no Colon (HCT116) 21711553
chr16 69105577 69108218 TCF7L2 GTRD no Colon (HCT116) 108203049
chr16 69105585 69108459 TCF7L2 GTRD no Colon (HCT116) 21711554
chr16 69105585 69108459 TCF7L2 GTRD no Colon (HCT116) 108203050
chr16 69105619 69108292 TCF7L2 GTRD no Colon (HCT116) 21711555
chr16 69105619 69108292 TCF7L2 GTRD no Colon (HCT116) 108203051
chr16 69105631 69108334 TCF7L2 GTRD no Colon (HCT116) 21711556
chr16 69105631 69108334 TCF7L2 GTRD no Colon (HCT116) 108203052
chr16 69105635 69107595 ZNF143 GTRD no Epithelial (MCF-7) 108203053
chr16 69106398 69107660 ZBTB33 GTRD no Lung (A549) 108203101
chr16 69106415 69107833 ZNF274 GTRD no Blood (GM12878) 108203102
chr16 69106441 69109237 ZBTB33 GTRD no Lung (A549) 108203103
chr16 69106447 69107722 ZBTB33 GTRD no Lung (A549) 108203104
chr16 69106468 69107569 ZBTB33 GTRD no Lung (A549) 108203106
chr16 69106472 69107356 ZBTB33 GTRD no Lung (A549) 108203107
chr16 69106477 69107912 ZBTB33 GTRD no Lung (A549) 108203110
chr16 69106478 69107970 ZBTB33 GTRD no Lung (A549) 108203111
chr16 69106490 69107345 ZNF143 GTRD no Epithelial (MCF-7) 108203113
chr16 69106494 69108895 ZNF274 GTRD no Blood (GM12878) 108203114
chr16 69106560 69107278 ZBTB33 GTRD no Brain (SK-N-SH) 108203117
chr16 69107227 69107248 ZNF263 JASPAR yes 11245901
chr16 69107228 69107241 ELF1 JASPAR yes 11245902
chr16 69107233 69107253 RREB1 JASPAR yes 11245903
Genes associated with rs55839534[chr16:69107241], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More