EnhancerDB
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  3. rs55839611[chr3:186666830]
Enhancers that have rs55839611[chr3:186666830]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 186664911 186668475 vista1210
VISTA
chr3 186665345 186714055 enh7749
Bone Marrow (K562) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Ovary Blood (OCI-LY7) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Lung (PC-9) Spleen Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs55839611[chr3:186666830]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 186666820 186666831 NFKB1 JASPAR yes 8362399
chr3 186666820 186666831 NFKB1 JASPAR yes 21017545
chr3 186666821 186666831 RELA JASPAR yes 8362401
chr3 186666821 186666831 RELA JASPAR yes 21017547
chr3 186666825 186666838 TFAP2A JASPAR yes 8362402
chr3 186666825 186666838 TFAP2B JASPAR yes 8362403
chr3 186666825 186666838 TFAP2C JASPAR yes 8362404
chr3 186666825 186666838 TFAP2A JASPAR yes 21017548
chr3 186666825 186666838 TFAP2B JASPAR yes 21017549
chr3 186666825 186666838 TFAP2C JASPAR yes 21017550
Genes associated with rs55839611[chr3:186666830], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More