EnhancerDB
  1. Home
  2. SNP
  3. rs558398323[chr12:122238482]
Enhancers that have rs558398323[chr12:122238482]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 122219767 122240055 enh2650
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs558398323[chr12:122238482]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 122229445 122242257 POLR2A UCSC Txn Factor no Conserved 108065674
chr12 122238478 122238489 E2F6 JASPAR yes 124248326
chr12 122238480 122238499 PAX5 JASPAR yes 124248327
chr12 122238482 122238487 ETS2 TRANSFAC yes 124248328
Genes associated with rs558398323[chr12:122238482], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More