EnhancerDB
  1. Home
  2. SNP
  3. rs558416001[chr6:138256322]
Enhancers that have rs558416001[chr6:138256322]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 138243425 138257435 enh23665
Skin (Keratinocyte) Prostate (PC-3) Prostate (RWPE1) Blood (T-cell) Esophagus Astrocyte Bone (Osteoblast) Blood (OCI-LY7) Blood (GM12878) Placenta Peripheral Blood (MM.1S) Lung (PC-9) Muscle (Myotube) Neural Stem Cells (H9) Thymus Stomach
Transcript factors that have rs558416001[chr6:138256322]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 138256303 138256322 CTCF JASPAR yes 105693778
chr6 138256309 138256328 RFX2 JASPAR yes 105693779
chr6 138256311 138256326 RFX5 JASPAR yes 105693780
chr6 138256317 138256329 ZBTB7A JASPAR yes 105693781
chr6 138256318 138256330 ZBTB7B JASPAR yes 105693782
chr6 138256318 138256330 ZBTB7C JASPAR yes 105693783
Genes associated with rs558416001[chr6:138256322], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More