EnhancerDB
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  3. rs55845199[chr1:178918398]
Enhancers that have rs55845199[chr1:178918398]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 178892945 178926835 enh769
Epithelial (MCF-7) Large Intestine Ovary Esophagus Astrocyte Bone (Osteoblast) Lung Stomach Placenta Uterus Blood (Karpas-422) Muscle (Myoblast) Pancreas Muscle (Myotube) Neural Stem Cells (H9) Heart
Transcript factors that have rs55845199[chr1:178918398]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 178918389 178918398 THAP1 JASPAR yes 33456361
chr1 178918396 178918412 SRF JASPAR yes 33456363
chr1 178918396 178918414 SRF JASPAR yes 33456364
chr1 178918397 178918401 LFA1 TRANSFAC yes 33456365
chr1 178918397 178918409 SRF JASPAR yes 33456366
Genes associated with rs55845199[chr1:178918398], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More