EnhancerDB
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  3. rs558464586[chr1:25040675]
Enhancers that have rs558464586[chr1:25040675]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 25026945 25066186 enh139
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs558464586[chr1:25040675]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 25040662 25040682 TBX19 JASPAR yes 27521981
chr1 25040664 25040680 T JASPAR yes 27521982
chr1 25040668 25040677 ZEB1 JASPAR yes 27521983
chr1 25040672 25040678 PTF TRANSFAC yes 27521984
Genes associated with rs558464586[chr1:25040675], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More