EnhancerDB
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  3. rs55848394[chr3:16097462]
Enhancers that have rs55848394[chr3:16097462]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 16088245 16123415 enh20381
Liver Astrocyte Colon (HCT116) Uterus Stomach Epithelial (MCF-7) Skin (Keratinocyte) Ovary Bone (Osteoblast) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Breast Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs55848394[chr3:16097462]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 16097459 16097471 EHF JASPAR yes 695708
chr3 16097459 16097471 ELF1 JASPAR yes 695709
chr3 16097459 16097472 ELF3 JASPAR yes 695710
chr3 16097460 16097465 SP1 TRANSFAC yes 695711
chr3 16097460 16097471 ELF5 JASPAR yes 695712
Genes associated with rs55848394[chr3:16097462], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More