EnhancerDB
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  3. rs558487366[chr17:39810011]
Enhancers that have rs558487366[chr17:39810011]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 39800139 39815735 enh17152
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Lung (PC-9) Lung (A549) Stomach Placenta Colon (HCT116) Thyroid Muscle (Myoblast) Breast Muscle (Myotube) Uterus Thymus Epithelial (MCF-7)
Transcript factors that have rs558487366[chr17:39810011]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 39809337 39810315 ZNF274 GTRD no Bone Marrow (K562) 108259204
chr17 39809991 39810507 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21758047
chr17 39809991 39810507 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108259205
chr17 39809997 39810011 EBF1 JASPAR yes 54268913
chr17 39809999 39810015 SRF JASPAR yes 54268916
chr17 39810010 39810014 LFA1 TRANSFAC yes 54268917
Genes associated with rs558487366[chr17:39810011], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More