EnhancerDB
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  3. rs558517466[chr1:206891388]
Enhancers that have rs558517466[chr1:206891388]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 206857225 206902007 enh27440
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Ovary Bone (Osteoblast) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs558517466[chr1:206891388]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 206889306 206891599 ZNF274 GTRD no Cervix (HeLa-S3) 21372470
chr1 206889306 206891599 ZNF274 GTRD no Cervix (HeLa-S3) 107863288
chr1 206889384 206891400 ZNF274 GTRD no Cervix (HeLa-S3) 21372471
chr1 206889384 206891400 ZNF274 GTRD no Cervix (HeLa-S3) 107863289
chr1 206889553 206893010 ZNF274 GTRD no Cervix (HeLa-S3) 21372472
chr1 206889553 206893010 ZNF274 GTRD no Cervix (HeLa-S3) 107863290
chr1 206889553 206893010 ZNF274 GTRD no Cervix (HeLa-S3) 107863291
chr1 206889554 206892160 ZNF274 GTRD no Cervix (HeLa-S3) 21372473
chr1 206889554 206892160 ZNF274 GTRD no Cervix (HeLa-S3) 107863292
chr1 206889565 206891730 ZNF274 GTRD no Cervix (HeLa-S3) 21372474
chr1 206889565 206891730 ZNF274 GTRD no Cervix (HeLa-S3) 107863293
chr1 206889627 206891681 ZNF274 GTRD no Cervix (HeLa-S3) 21372476
chr1 206889627 206891681 ZNF274 GTRD no Cervix (HeLa-S3) 107863295
chr1 206889691 206891429 ZNF274 GTRD no Cervix (HeLa-S3) 21372478
chr1 206889691 206891429 ZNF274 GTRD no Cervix (HeLa-S3) 107863297
chr1 206889721 206892113 AR GTRD no Prostate (PC-3) 21372479
chr1 206889721 206892113 AR GTRD no Prostate (PC-3) 107863298
chr1 206889748 206891729 ZNF274 GTRD no Cervix (HeLa-S3) 21372480
chr1 206889748 206891729 ZNF274 GTRD no Cervix (HeLa-S3) 107863299
chr1 206889749 206892007 ZNF274 GTRD no Cervix (HeLa-S3) 21372481
chr1 206889749 206892007 ZNF274 GTRD no Cervix (HeLa-S3) 107863300
chr1 206889750 206891417 ZNF274 GTRD no Cervix (HeLa-S3) 21372482
chr1 206889750 206891417 ZNF274 GTRD no Cervix (HeLa-S3) 107863301
chr1 206889843 206891829 ZNF274 GTRD no Bone Marrow (K562) 21372484
chr1 206889843 206891829 ZNF274 GTRD no Bone Marrow (K562) 107863303
chr1 206889866 206893225 ZNF274 GTRD no Cervix (HeLa-S3) 21372485
chr1 206889866 206893225 ZNF274 GTRD no Cervix (HeLa-S3) 107863304
chr1 206889866 206893225 ZNF274 GTRD no Cervix (HeLa-S3) 107863305
chr1 206889877 206891619 ZNF274 GTRD no Cervix (HeLa-S3) 21372486
chr1 206889877 206891619 ZNF274 GTRD no Cervix (HeLa-S3) 107863306
chr1 206889877 206891659 ZNF274 GTRD no Cervix (HeLa-S3) 21372487
chr1 206889877 206891659 ZNF274 GTRD no Cervix (HeLa-S3) 107863307
chr1 206889934 206891426 ZNF274 GTRD no Cervix (HeLa-S3) 21372489
chr1 206889934 206891426 ZNF274 GTRD no Cervix (HeLa-S3) 107863309
chr1 206889995 206891800 ZNF274 GTRD no Cervix (HeLa-S3) 21372491
chr1 206889995 206891800 ZNF274 GTRD no Cervix (HeLa-S3) 107863311
chr1 206890018 206891773 ZBTB33 GTRD no Lung (A549) 21372493
chr1 206890018 206891773 ZBTB33 GTRD no Lung (A549) 107863313
chr1 206890420 206891641 ZNF274 GTRD no Bone Marrow (K562) 21372505
chr1 206890420 206891641 ZNF274 GTRD no Bone Marrow (K562) 107863326
chr1 206891082 206892760 ZNF274 GTRD no Cervix (HeLa-S3) 21372553
chr1 206891082 206892760 ZNF274 GTRD no Cervix (HeLa-S3) 107863379
chr1 206891386 206891396 GSC2 JASPAR yes 34821762
chr1 206891386 206891396 GSC JASPAR yes 34821763
chr1 206891387 206891395 RHOXF1 JASPAR yes 34821764
chr1 206891387 206891396 PITX3 JASPAR yes 34821765
Genes associated with rs558517466[chr1:206891388], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More