EnhancerDB
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  3. rs55852302[chr16:20897400]
Enhancers that have rs55852302[chr16:20897400]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 20881645 20897799 enh3931
Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Blood (OCI-LY7) Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Large Intestine Esophagus Blood (GM12878) Lung (PC-9) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs55852302[chr16:20897400]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 20897385 20897400 FOXP1 JASPAR yes 9913248
chr16 20897385 20897406 IRF1 JASPAR yes 9913249
chr16 20897386 20897401 FOXP1 JASPAR yes 9913250
chr16 20897387 20897402 FOXP1 JASPAR yes 9913251
Genes associated with rs55852302[chr16:20897400], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More