EnhancerDB
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  3. rs558536273[chr1:201670534]
Enhancers that have rs558536273[chr1:201670534]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 201670008 201708415 enh12526
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Breast Muscle (Myoblast) Spleen Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs558536273[chr1:201670534]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 201670533 201670544 CDX2 JASPAR yes 34521706
chr1 201670533 201670548 FOXP1 JASPAR yes 34521707
chr1 201670534 201670538 TEAD2 TRANSFAC yes 34521708
chr1 201670534 201670545 HOXA10 JASPAR yes 34521709
Genes associated with rs558536273[chr1:201670534], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More