EnhancerDB
  1. Home
  2. SNP
  3. rs558550828[chr2:238061990]
Enhancers that have rs558550828[chr2:238061990]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 238060730 238076822 enh19385
Brain (SK-N-SH) Prostate (RWPE1) Esophagus Astrocyte Blood (OCI-LY7) Stomach Placenta Peripheral Blood (MM.1S) Uterus Neural Stem Cells (H9) Heart
Transcript factors that have rs558550828[chr2:238061990]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 238061989 238062001 PBX1 JASPAR yes 82085435
chr2 238061990 238062004 ONECUT1 JASPAR yes 82085436
chr2 238061990 238062004 ONECUT2 JASPAR yes 82085437
chr2 238061990 238062004 ONECUT3 JASPAR yes 82085438
Genes associated with rs558550828[chr2:238061990], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More