EnhancerDB
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  3. rs558565564[chr1:10448311]
Enhancers that have rs558565564[chr1:10448311]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 10444465 10451875 enh57
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Large Intestine Lung (PC-9) Esophagus Astrocyte Bone (Osteoblast) Lung Stomach Placenta Colon (HCT116) Uterus Thyroid Blood (Karpas-422) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Epithelial (MCF-7)
chr1 10447707 10448369 vista324
VISTA
Transcript factors that have rs558565564[chr1:10448311]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 10448302 10448315 DUXA JASPAR yes 26714524
chr1 10448302 10448315 DUXA JASPAR yes 118228477
chr1 10448303 10448314 DUX4 JASPAR yes 26714525
chr1 10448303 10448314 DUX4 JASPAR yes 118228478
chr1 10448305 10448319 ONECUT1 JASPAR yes 26714526
chr1 10448305 10448319 ONECUT1 JASPAR yes 118228479
chr1 10448306 10448322 SOX4 JASPAR yes 26714527
chr1 10448306 10448322 SOX4 JASPAR yes 118228480
chr1 10448308 10448318 PAX3 JASPAR yes 26714528
chr1 10448308 10448318 PAX7 JASPAR yes 26714529
chr1 10448308 10448318 PAX3 JASPAR yes 118228481
chr1 10448308 10448318 PAX7 JASPAR yes 118228482
chr1 10448309 10448324 AR JASPAR yes 26714530
chr1 10448309 10448324 AR JASPAR yes 118228483
Genes associated with rs558565564[chr1:10448311], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More