EnhancerDB
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  3. rs558596997[chr17:57081006]
Enhancers that have rs558596997[chr17:57081006]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 57067145 57084553 enh4500
Brain (SK-N-SH) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Liver Astrocyte Stomach Muscle (A673) Placenta Colon (HCT116) Uterus Blood (Karpas-422) Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs558596997[chr17:57081006]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 57081003 57081018 FOXP1 JASPAR yes 55039208
chr17 57081004 57081019 FOXP1 JASPAR yes 55039209
chr17 57081005 57081011 TBP TRANSFAC yes 55039210
chr17 57081005 57081020 FOXP1 JASPAR yes 55039211
chr17 57081006 57081021 FOXP1 JASPAR yes 55039212
Genes associated with rs558596997[chr17:57081006], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More