EnhancerDB
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  3. rs55860656[chr2:28867599]
Enhancers that have rs55860656[chr2:28867599]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 28854725 28893200 enh18394
Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs55860656[chr2:28867599]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 28867586 28867600 NR2F1 JASPAR yes 72663303
chr2 28867586 28867600 RXRB JASPAR yes 72663304
chr2 28867586 28867600 RXRG JASPAR yes 72663305
Genes associated with rs55860656[chr2:28867599], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More