EnhancerDB
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  3. rs558619588[chr16:81486490]
Enhancers that have rs558619588[chr16:81486490]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 81480185 81495915 enh31956
Bone Marrow (K562) Skin (Keratinocyte) Liver (HepG2) Brain (SK-N-SH) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Blood (T-cell) Bone (Osteoblast) Blood (GM12878) Colon (HCT116) Pancreas Muscle (Myotube) Neural Stem Cells (H9) Thymus Stomach
Transcript factors that have rs558619588[chr16:81486490]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 81486473 81486493 RREB1 JASPAR yes 11829992
chr16 81486473 81486494 IRF1 JASPAR yes 11829993
chr16 81486474 81486495 IRF1 JASPAR yes 11829994
chr16 81486475 81486490 FOXP1 JASPAR yes 11829995
chr16 81486478 81486498 RREB1 JASPAR yes 11829996
chr16 81486479 81486500 IRF1 JASPAR yes 11829997
chr16 81486480 81486495 FOXP1 JASPAR yes 11829999
chr16 81486481 81486496 STAT2 JASPAR yes 11830000
chr16 81486483 81486495 IRF1 JASPAR yes 11830001
chr16 81486484 81486505 IRF1 JASPAR yes 11830002
chr16 81486485 81486491 TCF4 TRANSFAC yes 11830003
chr16 81486485 81486500 FOXP1 JASPAR yes 11830004
chr16 81486485 81486506 IRF1 JASPAR yes 11830005
chr16 81486486 81486497 FOXP2 JASPAR yes 11830006
chr16 81486486 81486498 FOXC2 JASPAR yes 11830007
chr16 81486486 81486501 STAT2 JASPAR yes 11830008
chr16 81486486 81486507 IRF1 JASPAR yes 11830009
chr16 81486487 81486502 FOXP1 JASPAR yes 11830010
chr16 81486487 81486508 IRF1 JASPAR yes 11830011
chr16 81486488 81486509 IRF1 JASPAR yes 11830012
chr16 81486489 81486504 FOXP1 JASPAR yes 11830013
chr16 81486489 81486510 IRF1 JASPAR yes 11830014
chr16 81486490 81486505 FOXP1 JASPAR yes 11830015
Genes associated with rs558619588[chr16:81486490], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More