EnhancerDB
  1. Home
  2. SNP
  3. rs558638450[chr3:149097926]
Enhancers that have rs558638450[chr3:149097926]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 149097815 149115835 enh21019
Liver Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Heart
Transcript factors that have rs558638450[chr3:149097926]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 149097913 149097929 GLIS1 JASPAR yes 6488092
chr3 149097914 149097928 GLIS2 JASPAR yes 6488094
chr3 149097914 149097928 GLIS3 JASPAR yes 6488095
chr3 149097914 149097929 NR2C2 JASPAR yes 6488096
chr3 149097915 149097929 RXRB JASPAR yes 6488097
chr3 149097915 149097929 RXRG JASPAR yes 6488098
chr3 149097918 149097928 ZNF740 JASPAR yes 6488100
chr3 149097922 149097935 NFKB2 JASPAR yes 6488101
chr3 149097924 149097928 ESR1 TRANSFAC yes 6488102
chr3 149097926 149097945 REST JASPAR yes 6488103
Genes associated with rs558638450[chr3:149097926], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More