EnhancerDB
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  3. rs558639784[chr1:54778400]
Enhancers that have rs558639784[chr1:54778400]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 54761072 54782679 enh11866
Liver (HepG2) Brain (SK-N-SH) Large Intestine Blood (T-cell) Esophagus Astrocyte Bone (Osteoblast) Stomach Placenta Thyroid Uterus Embryonic Stem Cell Line (H1-hESC) Pancreas Spleen Muscle (Myotube) Neural Stem Cells (H9) Thymus Heart
Transcript factors that have rs558639784[chr1:54778400]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 54778224 54779072 ZNF143 GTRD no Epithelial (MCF-7) 107804771
chr1 54778397 54778409 ZBTB7B JASPAR yes 28972050
chr1 54778397 54778409 ZBTB7C JASPAR yes 28972051
chr1 54778400 54778415 RUNX2 JASPAR yes 28972052
Genes associated with rs558639784[chr1:54778400], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More