EnhancerDB
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  3. rs558640159[chr17:48925182]
Enhancers that have rs558640159[chr17:48925182]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 48919785 48943275 enh4463
Skin (Keratinocyte) Liver (HepG2) Cervix (HeLa-S3) Epithelial (MCF-7) Large Intestine Prostate (RWPE1) Blood (T-cell) Lung (PC-9) Bone (Osteoblast) Stomach Placenta Peripheral Blood (MM.1S) Blood (Karpas-422) Muscle (Myoblast) Pancreas Muscle (Myotube) Uterus Thymus Heart
Transcript factors that have rs558640159[chr17:48925182]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 48924916 48925465 ZNF143 GTRD no Epithelial (MCF-7) 21769949
chr17 48924929 48925688 ZNF143 GTRD no Epithelial (MCF-7) 21769950
chr17 48925176 48925188 PKNOX2 JASPAR yes 54724781
chr17 48925177 48925187 ID4 JASPAR yes 54724782
chr17 48925181 48925189 MEIS2 JASPAR yes 54724783
chr17 48925181 48925189 MEIS3 JASPAR yes 54724784
chr17 48925182 48925186 NFE TRANSFAC yes 54724785
Genes associated with rs558640159[chr17:48925182], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More