EnhancerDB
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  3. rs558675216[chr12:125032759]
Enhancers that have rs558675216[chr12:125032759]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 125019933 125050377 enh2674
Bone Marrow (K562) Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Thymus Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs558675216[chr12:125032759]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 125031996 125033858 ZNF143 GTRD no Epithelial (MCF-7) 21581013
chr12 125031996 125033858 ZNF143 GTRD no Epithelial (MCF-7) 108068905
chr12 125032378 125033631 ZNF143 GTRD no Epithelial (MCF-7) 21581014
chr12 125032378 125033631 ZNF143 GTRD no Epithelial (MCF-7) 108068906
chr12 125032747 125032762 FOXA1 JASPAR yes 124392465
chr12 125032748 125032759 FOXB1 JASPAR yes 124392466
chr12 125032748 125032759 FOXC1 JASPAR yes 124392467
Genes associated with rs558675216[chr12:125032759], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More