EnhancerDB
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  3. rs55869417[chr6:33571298]
Enhancers that have rs55869417[chr6:33571298]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 33549445 33581115 enh23159
Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Ovary Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs55869417[chr6:33571298]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 33571287 33571298 PROP1 JASPAR yes 101159886
chr6 33571289 33571299 HOXA13 JASPAR yes 101159888
chr6 33571289 33571299 HOXD13 JASPAR yes 101159889
chr6 33571289 33571300 HOXA10 JASPAR yes 101159890
chr6 33571290 33571299 CDX1 JASPAR yes 101159891
chr6 33571290 33571301 CDX2 JASPAR yes 101159892
chr6 33571294 33571306 FOXC2 JASPAR yes 101159893
chr6 33571296 33571300 YY1 TRANSFAC yes 101159894
chr6 33571297 33571312 FOXP1 JASPAR yes 101159895
chr6 33571298 33571313 FOXP1 JASPAR yes 101159896
Genes associated with rs55869417[chr6:33571298], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More