EnhancerDB
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  3. rs558705063[chr1:28749934]
Enhancers that have rs558705063[chr1:28749934]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 28732865 28757735 enh186
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-SH) Large Intestine Prostate (RWPE1) Astrocyte Blood (GM12878) Stomach Muscle (A673) Colon (HCT116) Blood (Karpas-422) Lung (PC-9) Pancreas (Panc1) Muscle (Myotube) Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs558705063[chr1:28749934]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 28749920 28749934 ONECUT2 JASPAR yes 27769515
chr1 28749920 28749934 ONECUT3 JASPAR yes 27769516
chr1 28749920 28749935 FOXP1 JASPAR yes 27769517
chr1 28749920 28749935 HNF1A JASPAR yes 27769518
chr1 28749921 28749935 POU4F1 JASPAR yes 27769519
chr1 28749921 28749936 FOXA1 JASPAR yes 27769520
chr1 28749921 28749937 POU4F2 JASPAR yes 27769521
chr1 28749921 28749937 POU4F3 JASPAR yes 27769522
chr1 28749922 28749934 FOXC2 JASPAR yes 27769526
chr1 28749923 28749935 FOXI1 JASPAR yes 27769527
chr1 28749924 28749938 ONECUT2 JASPAR yes 27769528
chr1 28749924 28749938 ONECUT3 JASPAR yes 27769529
chr1 28749924 28749939 FOXP1 JASPAR yes 27769530
chr1 28749924 28749939 HNF1A JASPAR yes 27769531
chr1 28749925 28749939 POU4F1 JASPAR yes 27769532
chr1 28749925 28749940 FOXA1 JASPAR yes 27769533
chr1 28749925 28749941 POU4F2 JASPAR yes 27769534
chr1 28749925 28749941 POU4F3 JASPAR yes 27769535
chr1 28749926 28749937 FOXB1 JASPAR yes 27769536
chr1 28749926 28749937 FOXC1 JASPAR yes 27769537
chr1 28749926 28749937 PROP1 JASPAR yes 27769538
chr1 28749926 28749938 FOXC2 JASPAR yes 27769539
chr1 28749927 28749939 FOXI1 JASPAR yes 27769540
chr1 28749928 28749942 ONECUT2 JASPAR yes 27769541
chr1 28749928 28749942 ONECUT3 JASPAR yes 27769542
chr1 28749928 28749943 FOXP1 JASPAR yes 27769543
chr1 28749928 28749943 HNF1A JASPAR yes 27769544
chr1 28749929 28749943 POU4F1 JASPAR yes 27769545
chr1 28749929 28749944 FOXA1 JASPAR yes 27769546
chr1 28749929 28749945 POU4F2 JASPAR yes 27769547
chr1 28749929 28749945 POU4F3 JASPAR yes 27769548
chr1 28749930 28749941 FOXB1 JASPAR yes 27769549
chr1 28749930 28749941 FOXC1 JASPAR yes 27769550
chr1 28749930 28749941 PROP1 JASPAR yes 27769551
chr1 28749930 28749942 FOXC2 JASPAR yes 27769552
chr1 28749931 28749943 FOXI1 JASPAR yes 27769553
chr1 28749932 28749946 ONECUT2 JASPAR yes 27769554
chr1 28749932 28749946 ONECUT3 JASPAR yes 27769555
chr1 28749932 28749947 FOXP1 JASPAR yes 27769556
chr1 28749932 28749947 HNF1A JASPAR yes 27769557
chr1 28749933 28749947 POU4F1 JASPAR yes 27769558
chr1 28749933 28749948 FOXA1 JASPAR yes 27769559
chr1 28749933 28749949 POU4F2 JASPAR yes 27769560
chr1 28749933 28749949 POU4F3 JASPAR yes 27769561
chr1 28749934 28749945 FOXB1 JASPAR yes 27769562
chr1 28749934 28749945 FOXC1 JASPAR yes 27769563
chr1 28749934 28749945 PROP1 JASPAR yes 27769564
chr1 28749934 28749946 FOXC2 JASPAR yes 27769565
Genes associated with rs558705063[chr1:28749934], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More