EnhancerDB
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  3. rs55871460[chr2:38380980]
Enhancers that have rs55871460[chr2:38380980]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 38370585 38382295 enh18455
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Epithelial (MCF-7) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Blood (GM12878) Placenta Colon (HCT116) Breast Uterus Muscle (Myoblast) Pancreas Muscle (Myotube) Neural Stem Cells (H9) Thymus Heart
chr2 38380770 38381135 vista31092
VISTA
Transcript factors that have rs55871460[chr2:38380980]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 38380978 38380988 EMX1 JASPAR yes 22037253
chr2 38380978 38380988 EMX2 JASPAR yes 22037254
chr2 38380978 38380988 EN2 JASPAR yes 22037255
chr2 38380978 38380988 EVX1 JASPAR yes 22037256
chr2 38380978 38380988 EVX2 JASPAR yes 22037257
chr2 38380978 38380988 GBX1 JASPAR yes 22037258
chr2 38380978 38380988 HOXA2 JASPAR yes 22037259
chr2 38380978 38380988 HOXB2 JASPAR yes 22037260
chr2 38380978 38380988 HOXB3 JASPAR yes 22037261
chr2 38380978 38380988 MEOX1 JASPAR yes 22037262
chr2 38380978 38380988 MEOX2 JASPAR yes 22037263
chr2 38380978 38380988 EMX1 JASPAR yes 73115018
chr2 38380978 38380988 EMX2 JASPAR yes 73115019
chr2 38380978 38380988 EN2 JASPAR yes 73115020
chr2 38380978 38380988 EVX1 JASPAR yes 73115021
chr2 38380978 38380988 EVX2 JASPAR yes 73115022
chr2 38380978 38380988 GBX1 JASPAR yes 73115023
chr2 38380978 38380988 HOXA2 JASPAR yes 73115024
chr2 38380978 38380988 HOXB2 JASPAR yes 73115025
chr2 38380978 38380988 HOXB3 JASPAR yes 73115026
chr2 38380978 38380988 MEOX1 JASPAR yes 73115027
chr2 38380978 38380988 MEOX2 JASPAR yes 73115028
Genes associated with rs55871460[chr2:38380980], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More