EnhancerDB
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  3. rs558726433[chr12:50926034]
Enhancers that have rs558726433[chr12:50926034]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 50906745 50954311 enh2346
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs558726433[chr12:50926034]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 50923339 50928617 ZNF274 GTRD no Bone Marrow (K562) 21545031
chr12 50923339 50928617 ZNF274 GTRD no Bone Marrow (K562) 108031199
chr12 50923339 50928617 ZNF274 GTRD no Bone Marrow (K562) 108031200
chr12 50923402 50926073 ZNF274 GTRD no Blood (GM12878) 21545033
chr12 50923402 50926073 ZNF274 GTRD no Blood (GM12878) 108031202
chr12 50924125 50926098 ZNF274 GTRD no Liver (HepG2) 21545069
chr12 50924125 50926098 ZNF274 GTRD no Liver (HepG2) 108031238
chr12 50926024 50926035 FOSL2 JASPAR yes 120839444
chr12 50926025 50926036 NFE2 JASPAR yes 120839445
Genes associated with rs558726433[chr12:50926034], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More