EnhancerDB
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  3. rs558761666[chr19:6056154]
Enhancers that have rs558761666[chr19:6056154]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 6055365 6071655 enh17885
Bone Marrow (K562) Astrocyte Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Neural Stem Cells (H9) Thymus Prostate (PC-3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs558761666[chr19:6056154]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 6055956 6057684 ZNF143 GTRD no Epithelial (MCF-7) 21844082
chr19 6055956 6057684 ZNF143 GTRD no Epithelial (MCF-7) 108376373
chr19 6056010 6056869 ZNF143 GTRD no Epithelial (MCF-7) 21844083
chr19 6056010 6056869 ZNF143 GTRD no Epithelial (MCF-7) 108376374
chr19 6056031 6057780 TCF7L2 GTRD no Colon (HCT116) 108376375
chr19 6056137 6056876 ZBTB33 GTRD no Lung (A549) 108376376
chr19 6056148 6056871 ZNF143 GTRD no Epithelial (MCF-7) 21844084
chr19 6056148 6056871 ZNF143 GTRD no Epithelial (MCF-7) 108376377
Genes associated with rs558761666[chr19:6056154], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More