EnhancerDB
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  3. rs558775485[chr12:54748850]
Enhancers that have rs558775485[chr12:54748850]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 54746942 54756928 enh2378
Cervix (HeLa-S3) Brain (SK-N-SH) Prostate (RWPE1) Astrocyte Bone (Osteoblast) Uterus Blood (Karpas-422) Muscle (Myoblast) Pancreas (Panc1) Muscle (Myotube) Neural Stem Cells (H9) Stomach
Transcript factors that have rs558775485[chr12:54748850]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 54748612 54749965 ZBTB33 GTRD no Lung (A549) 108037391
chr12 54748650 54750040 ZBTB33 GTRD no Lung (A549) 108037392
chr12 54748785 54750079 ZNF274 GTRD no Blood (GM12878) 108037393
chr12 54748839 54748860 ZNF263 JASPAR yes 121036216
chr12 54748850 54748861 E2F6 JASPAR yes 121036218
Genes associated with rs558775485[chr12:54748850], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More