EnhancerDB
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  3. rs558780012[chr1:22358771]
Enhancers that have rs558780012[chr1:22358771]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 22343446 22360375 enh116
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Blood (T-cell) Esophagus Astrocyte Bone (Osteoblast) Placenta Colon (HCT116) Peripheral Blood (MM.1S) Pancreas (Panc1) Blood (Karpas-422) Lung (PC-9) Spleen Uterus Thymus Stomach
Transcript factors that have rs558780012[chr1:22358771]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 22358760 22358781 IRF1 JASPAR yes 27340246
chr1 22358764 22358776 IRF1 JASPAR yes 27340247
chr1 22358771 22358776 GATA1 TRANSFAC yes 27340248
Genes associated with rs558780012[chr1:22358771], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More