EnhancerDB
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  3. rs55879002[chr1:213088664]
Enhancers that have rs55879002[chr1:213088664]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 213086665 213108095 enh27473
Bone Marrow (K562) Liver (HepG2) Cervix (HeLa-S3) Large Intestine Ovary Astrocyte Bone (Osteoblast) Lung Blood (GM12878) Uterus Muscle (Myoblast) Muscle (Myotube) Neural Stem Cells (H9) Stomach
Transcript factors that have rs55879002[chr1:213088664]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 213088460 213089116 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 107869392
chr1 213088487 213088935 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107869393
chr1 213088579 213089015 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 107869394
chr1 213088590 213088914 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107869395
chr1 213088601 213089185 ZNF274 GTRD no Bone Marrow (K562) 21379247
chr1 213088601 213089185 ZNF274 GTRD no Bone Marrow (K562) 107869396
chr1 213088632 213089264 CTCF UCSC Txn Factor no Conserved 107869397
chr1 213088640 213088976 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107869398
chr1 213088644 213089014 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21379248
chr1 213088644 213089014 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107869399
chr1 213088652 213089012 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21379249
chr1 213088652 213089012 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107869400
chr1 213088653 213089023 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21379250
chr1 213088653 213089023 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107869401
Genes associated with rs55879002[chr1:213088664], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More