EnhancerDB
  1. Home
  2. SNP
  3. rs558790884[chr16:87879173]
Enhancers that have rs558790884[chr16:87879173]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 87873744 87902035 enh4182
Bone Marrow (K562) Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Muscle (A673) Heart
chr16 87878915 87879213 vista23458
VISTA
Transcript factors that have rs558790884[chr16:87879173]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 87877016 87882827 POLR2A UCSC Txn Factor no Conserved 108221239
chr16 87877487 87880002 ZNF143 GTRD no Epithelial (MCF-7) 108221240
chr16 87877900 87880019 ZNF274 GTRD no Liver (HepG2) 21735182
chr16 87877900 87880019 ZNF274 GTRD no Liver (HepG2) 108221241
chr16 87878050 87879438 ZNF274 GTRD no Liver (HepG2) 21735183
chr16 87878050 87879438 ZNF274 GTRD no Liver (HepG2) 108221242
chr16 87878350 87880319 ZNF143 GTRD no Epithelial (MCF-7) 108221243
chr16 87878640 87879216 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108221250
chr16 87878928 87879316 ZNF143 GTRD no Epithelial (MCF-7) 108221255
chr16 87878996 87879536 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108221256
chr16 87879159 87879173 PLAG1 JASPAR yes 12246372
chr16 87879159 87879173 PLAG1 JASPAR yes 49415461
chr16 87879168 87880759 ZNF274 GTRD no Liver (HepG2) 21735194
chr16 87879168 87880759 ZNF274 GTRD no Liver (HepG2) 108221257
Genes associated with rs558790884[chr16:87879173], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More