EnhancerDB
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  3. rs558817879[chr1:52814298]
Enhancers that have rs558817879[chr1:52814298]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 52812451 52818953 enh26699
Prostate (RWPE1) Astrocyte Neural Stem Cells (H9) Bone (Osteoblast) Spleen Uterus Stomach
Transcript factors that have rs558817879[chr1:52814298]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 52814284 52814304 PPARG JASPAR yes 28894410
chr1 52814286 52814304 ESR2 JASPAR yes 28894411
chr1 52814287 52814302 ESR2 JASPAR yes 28894412
chr1 52814288 52814303 HNF4A JASPAR yes 28894413
chr1 52814289 52814303 RXRB JASPAR yes 28894414
chr1 52814289 52814303 RXRG JASPAR yes 28894415
chr1 52814289 52814304 HNF4G JASPAR yes 28894416
chr1 52814289 52814304 NR2C2 JASPAR yes 28894417
chr1 52814292 52814305 NR2F1 JASPAR yes 28894418
chr1 52814294 52814305 ESRRA JASPAR yes 28894419
chr1 52814295 52814303 NR4A2 JASPAR yes 28894420
chr1 52814296 52814306 RORA JASPAR yes 28894421
chr1 52814297 52814318 IRF1 JASPAR yes 28894422
Genes associated with rs558817879[chr1:52814298], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More